Job #

042474

Department Code

21820-3020

Department

Biology

Job Title

Research Analyst

Location

Syracuse, NY

Campus

Syracuse, NY

Commitment to On-Campus Experience

Syracuse University is committed to delivering an exceptional student experience through vibrant, engaged campus communities. This position is based at the above campus location and requires regular in-person presence to support our students, collaborate with colleagues, and contribute to our thriving academic environment. Syracuse University values the collaboration, mentorship, and spontaneous connections that happen when our community works together on campus. Remote work arrangements are limited in accordance with University policy.

Pay Range

$62,400 - $76,100

Pay Determination

Pay rates at Syracuse University are based on a combination of factors including, but not limited to, the job responsibilities; the candidate’s education, training, work experience and key competencies; the university’s strategic priorities; internal peer equity; applicable federal, state, local laws, grant funding and contractual requisites; and external market analyses.

Staff Level

S5

FLSA Status

Exempt

Hours

Standard University business hours

8:30am – 5:00pm (academic year)

8:00am – 4:30pm (summer)

Hours may vary based on operational needs.

Job Type

Full-time

Unionized Position Code

UA

Job Description

The Ahmed-Braimah Lab seeks a Research Analyst (RA) to support a diverse portfolio of research projects focused on evolutionary and functional genomics. They will work closely with the Principal Investigator, graduate students, postdocs, and collaborating laboratories to manage, analyze, and interpret large-scale genomic and transcriptomic datasets. The RA will apply established analytical tools, develop custom pipelines, and create new computational approaches to address cutting-edge biological questions.

Projects involve whole-genome and resequencing analyses, RNA-Seq and single-cell omics, population genomics, regulatory genomics (ATAC-Seq, ChIP-Seq, CUT&RUN), comparative genomics, genome assembly and annotation, CRISPR screens, and computational workflows for evolutionary and functional analyses. This position requires a strong computational background, demonstrated experience with next-generation sequencing analysis, and enthusiasm for collaborative work is preferred. Excellent communication skills and a desire to train junior scientists are essential, as the position includes mentorship and teaching responsibilities.

This position is part of a bargaining unit and is represented by the union SEIU, Local 200United.

Education and Experience

1. M.S. in computer science or a related field, or a Ph.D. in biology with extensive graduate training in computational biology or an equivalent field, as evidenced in published work and/or CV.

Skills and Knowledge

1. Demonstrated experience analyzing high-throughput sequencing datasets.
2. Proficiency with scripting languages (e.g., Python, R, Bash).
3. Experience working in Linux/Unix environments and with HPC or cloud computing.
4. Strong organizational skills and the ability to manage multiple concurrent projects.
5. Effective communication skills and interest in working in a collaborative, interdisciplinary team.
6. Experience with workflow managers such as Snakemake, Nextflow, or WDL/Cromwell.
7. Familiarity with version control (Git/GitHub) and collaborative software development.
8. Background in evolutionary genetics, population genomics, or comparative genomics.
9. Experience with genome assembly/annotation, pangenome analysis, or phylogenetics.
10. Knowledge of statistical modeling, machine learning, or advanced data visualization.
11. Prior mentoring or teaching experience in computational skills.

Responsibilities

1. Perform computational analysis on collaborative research projects.
2. Manage, analyze, and interpret large-scale genomic and transcriptomic datasets.
3. Apply established analytical tools, develop custom pipelines, and create new computational approaches to address cutting-edge biological questions.
4. Train and assist graduate students with bioinformatics projects.
5. Maintain lab computing infrastructure.
6. Maintain and curate genomics datasets, laboratory software with version control, and manage computing clusters and backup storage.
7. Other duties as assigned.

Physical Requirements

Not Applicable

Tools/Equipment

Not Applicable

Application Instructions

In addition to completing an online application, please attach a resume and cover letter.

About Syracuse University

Syracuse University is a private, international research university with distinctive academics, diversely unique offerings, and an undeniable spirit. Located in the geographic heart of New York State, with a global footprint, and over 150 years of history, Syracuse University offers a quintessential college experience.

The scope of Syracuse University is a testament to its strengths: a pioneering history dating back to 1870; a choice of more than 200 majors, 100 minors, and 200 advanced degree programs offered across the University’s 13 schools and colleges; over 15,000 undergraduates and over 6,000 graduate students; more than a quarter of a million alumni in 160 countries; and a student population from all 50 U.S. states and 123 countries. For more information, please visit http://www.syracuse.edu.

About the Syracuse area

Syracuse is a medium-sized city situated in the geographic center of New York State approximately 250 miles northwest of New York City. The metro-area population totals approximately 500,000. The area offers a low cost of living and provides many social, cultural, and recreational options, including parks, museums, festivals, professional regional theater, and premier shopping venues. Syracuse and Central New York present a wide range of seasonal recreation and attractions ranging from water skiing and snow skiing, hiking in the Adirondacks, touring the historic sites, visiting wineries along the Finger Lakes, and biking on trails along the Erie Canal.

EEO Statement

Syracuse University is an equal-opportunity institution. The University prohibits discrimination and harassment based on race, color, creed, religion, sex, gender, national origin, citizenship, ethnicity, marital status, age, disability, sexual orientation, gender identity and gender expression, veteran status, or any other status protected by applicable law to the extent prohibited by law. This nondiscrimination policy covers admissions, employment, and access to and treatment in University programs, services, and activities.

Commitment to Supporting and Hiring Veterans

Syracuse University has a long history of engaging veterans and the military-connected community through its educational programs, community outreach, and employment programs. After World War II, Syracuse University welcomed more than 10,000 returning veterans to our campus, and those veterans literally transformed Syracuse University into the national research institution it is today. The University’s contemporary commitment to veterans builds on this historical legacy, and extends to both class-leading initiatives focused on making an SU degree accessible and affordable to the post-9/11 generation of veterans, and also programs designed to position Syracuse University as the employer of choice for military veterans, members of the Guard and Reserve, and military family members.

Commitment to a Respectful and Welcoming Community

Syracuse University fosters a welcoming learning environment where students, faculty, administrators, staff, curriculum, social activities, governance, and all aspects of campus life reflect a broad range of perspectives and experiences. The University community values the many similarities and differences among individuals and groups. At Syracuse, we are committed to preparing students to engage with and appreciate the richness of backgrounds, beliefs, and experiences that shape our society. To achieve this, we strive to cultivate a community that respects and encourages open dialogue, understanding, and mutual respect.

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